Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL11A1P12107 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COL11A1P12107 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL11A1P12107 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
COL11A1P12107 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.8□□□□□ -1.48
COL11A1P12107 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL11A1P12107 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL11A1P12107 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL11A1P12107 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.8□□□□□ -1.48
COL11A1P12107 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL11A1P12107 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL11A1P12107 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.8□□□□□ -1.48
COL11A1P12107 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COL11A1P12107 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL11A1P12107 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL11A1P12107 AL590240.1-201ENST00000334118 313 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 MIR192-201ENST00000384915 110 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 AL035079.1-201ENST00000405210 287 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL11A1P12107 CHEK2P3-201ENST00000416118 248 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 GSTA7P-201ENST00000438425 448 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 AL138878.2-201ENST00000440581 1241 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.8□□□□□ -1.48
COL11A1P12107 BX842559.2-201ENST00000451418 605 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 RN7SL205P-201ENST00000490174 284 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 RAB9BP1-201ENST00000519581 626 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.8□□□□□ -1.48
COL11A1P12107 AC136777.2-201ENST00000522979 358 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.8□□□□□ -1.48
COL11A1P12107 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.8□□□□□ -1.48
COL11A1P12107 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.8□□□□□ -1.48
COL11A1P12107 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.8□□□□□ -1.48
COL11A1P12107 RN7SL52P-201ENST00000584271 284 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 MIR7853-201ENST00000584820 132 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 RN7SL722P-201ENST00000617780 284 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 RN7SL565P-201ENST00000618246 284 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 MIR6839-201ENST00000620425 113 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 AC105105.5-201ENST00000622635 1294 ntBASIC5.8□□□□□ -1.48
COL11A1P12107 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.8□□□□□ -1.48
COL11A1P12107 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
COL11A1P12107 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL11A1P12107 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL11A1P12107 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.8□□□□□ -1.48
COL11A1P12107 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL11A1P12107 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL11A1P12107 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL11A1P12107 AC092681.1-201ENST00000297369 291 ntBASIC5.79□□□□□ -1.48
COL11A1P12107 RPL7AP49-201ENST00000429522 581 ntBASIC5.79□□□□□ -1.48
COL11A1P12107 AL591438.1-201ENST00000433508 581 ntBASIC5.79□□□□□ -1.48
COL11A1P12107 AL049745.1-201ENST00000433953 286 ntBASIC5.79□□□□□ -1.48
COL11A1P12107 PRPF38AP2-201ENST00000438179 851 ntBASIC5.79□□□□□ -1.48
COL11A1P12107 AL691482.1-201ENST00000453255 87 ntBASIC5.79□□□□□ -1.48
COL11A1P12107 OR5AN2P-201ENST00000534535 896 ntBASIC5.79□□□□□ -1.48
COL11A1P12107 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.79□□□□□ -1.48
COL11A1P12107 AL512310.9-201ENST00000553311 948 ntBASIC5.79□□□□□ -1.48
COL11A1P12107 AC091042.1-201ENST00000579213 173 ntBASIC5.79□□□□□ -1.48
COL11A1P12107 MIR4737-201ENST00000583979 81 ntBASIC5.79□□□□□ -1.48
COL11A1P12107 AC011487.3-201ENST00000593607 453 ntBASIC5.79□□□□□ -1.48
COL11A1P12107 AC025857.2-201ENST00000602711 238 ntBASIC5.79□□□□□ -1.48
COL11A1P12107 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.79□□□□□ -1.48
COL11A1P12107 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL11A1P12107 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COL11A1P12107 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.79□□□□□ -1.48
COL11A1P12107 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
COL11A1P12107 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL11A1P12107 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL11A1P12107 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.79□□□□□ -1.48
COL11A1P12107 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL11A1P12107 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL11A1P12107 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.79□□□□□ -1.48
COL11A1P12107 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COL11A1P12107 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
COL11A1P12107 AC126755.2-208ENST00000327792 462 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 AC138969.1-213ENST00000331436 462 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 RNA5SP345-201ENST00000410646 108 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.78□□□□□ -1.48
COL11A1P12107 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.78□□□□□ -1.48
COL11A1P12107 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.78□□□□□ -1.48
COL11A1P12107 RPL36AP15-201ENST00000444514 266 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 IGHV5-78-201ENST00000450948 295 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 AC021193.1-201ENST00000511607 420 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 AC098976.1-201ENST00000513014 541 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 RNA5SP116-201ENST00000516132 98 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.78□□□□□ -1.48
COL11A1P12107 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.78□□□□□ -1.48
COL11A1P12107 MIR3667-201ENST00000581025 74 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 AP000346.3-201ENST00000622821 210 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.78□□□□□ -1.48
COL11A1P12107 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL11A1P12107 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL11A1P12107 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL11A1P12107 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL11A1P12107 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL11A1P12107 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COL11A1P12107 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL11A1P12107 MAPK10-263ENST00000641052 4307 ntBASIC5.78□□□□□ -1.48
COL11A1P12107 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.78□□□□□ -1.48
COL11A1P12107 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL11A1P12107 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms