Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 SUGT1P2-201ENST00000379452 992 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 RN7SKP240-201ENST00000410583 375 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 DEFA9P-201ENST00000433042 285 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 EIF5AP4-201ENST00000441206 465 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 VN1R48P-201ENST00000448149 1036 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 SNORD125-201ENST00000459538 96 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AL122020.1-201ENST00000472287 459 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 OR5H7P-201ENST00000514084 930 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 Y_RNA.667-201ENST00000516212 107 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 RNA5SP438-201ENST00000516561 112 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 RNU6-889P-201ENST00000517189 103 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 TRIM77BP-201ENST00000524985 1119 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AC079064.1-201ENST00000528365 362 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AL133247.2-201ENST00000603236 482 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AC129778.1-202ENST00000623812 261 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AL591379.1-207ENST00000635982 261 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AC099654.6-201ENST00000636487 512 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AC073869.10-201ENST00000642016 354 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 TRIM51GP-201ENST00000534741 1350 ntBASIC5.36□□□□□ -1.55
LINGO3P0C6S8 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
LINGO3P0C6S8 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 RN7SKP78-201ENST00000364711 318 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 AL358176.3-201ENST00000420757 454 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 RNGTTP1-201ENST00000420965 728 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 AC066692.1-201ENST00000421721 457 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 FAR1P1-201ENST00000427163 934 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 AC007563.3-201ENST00000433233 371 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 NDUFS5P5-201ENST00000437256 321 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 AL691517.1-201ENST00000440833 1235 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 RPS15AP29-201ENST00000445539 400 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 RPSAP39-201ENST00000467439 883 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 LARP7P4-201ENST00000481075 878 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 AC006539.1-201ENST00000481419 501 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 RPL37AP8-201ENST00000494116 276 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 AC027369.5-201ENST00000533838 755 ntBASIC5.35□□□□□ -1.55
LINGO3P0C6S8 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.35□□□□□ -1.55
LINGO3P0C6S8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms