Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 AC092435.4-201ENST00000623012 4159 ntBASIC3.99□□□□□ -1.77
HLA-DQA1P01909 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DQA1P01909 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 RNF19BPY-201ENST00000458209 1550 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 COX6B1P3-201ENST00000312310 260 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 MTHFD2P5-201ENST00000320415 844 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 ODF3-202ENST00000342593 386 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 RNA5SP110-201ENST00000362638 115 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 RNA5SP223-201ENST00000365174 120 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 NPM1P22-201ENST00000427761 952 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AMYP1-201ENST00000440059 1023 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC097463.1-201ENST00000447288 481 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 MTND4LP12-201ENST00000448237 295 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 BX842559.2-201ENST00000451418 605 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 RN7SL583P-201ENST00000475692 287 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC016687.1-201ENST00000482574 353 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC073073.1-201ENST00000493920 463 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 HSD3BP3-201ENST00000514706 994 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 RNU4-18P-201ENST00000516751 149 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 WBP1LP3-201ENST00000523033 208 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC036111.2-201ENST00000533247 901 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC025423.2-201ENST00000537570 439 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC124916.2-201ENST00000604416 224 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 MIR6071-201ENST00000616741 78 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC025262.3-201ENST00000623666 360 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AP003400.3-201ENST00000624904 346 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC023421.1-201ENST00000590535 1785 ntBASIC3.98□□□□□ -1.77
HLA-DQA1P01909 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1P01909 AC000123.3-201ENST00000624029 4975 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 CASC19-238ENST00000641523 1558 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC120338.1-201ENST00000625074 1541 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 AC027290.2-201ENST00000623210 18662 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 OR7E25P-201ENST00000344844 931 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 RNA5SP30-201ENST00000365552 115 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1P01909 SNORA51.9-201ENST00000384295 124 ntBASIC3.97□□□□□ -1.77
HLA-DQA1P01909 MIR130B-202ENST00000385018 82 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms