Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HCN1O60741 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.09□□□□□ -1.59
HCN1O60741 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.09□□□□□ -1.59
HCN1O60741 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HCN1O60741 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
HCN1O60741 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
HCN1O60741 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.09□□□□□ -1.6
HCN1O60741 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HCN1O60741 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HCN1O60741 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HCN1O60741 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HCN1O60741 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HCN1O60741 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
HCN1O60741 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.08□□□□□ -1.6
HCN1O60741 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HCN1O60741 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HCN1O60741 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.08□□□□□ -1.6
HCN1O60741 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.08□□□□□ -1.6
HCN1O60741 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HCN1O60741 MIR551A-201ENST00000385042 96 ntBASIC5.08□□□□□ -1.6
HCN1O60741 EI24P3-201ENST00000399046 1062 ntBASIC5.08□□□□□ -1.6
HCN1O60741 SNORA11B-201ENST00000408175 129 ntBASIC5.08□□□□□ -1.6
HCN1O60741 RPL7P56-201ENST00000429441 717 ntBASIC5.08□□□□□ -1.6
HCN1O60741 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.08□□□□□ -1.6
HCN1O60741 NDUFB4P8-201ENST00000435351 367 ntBASIC5.08□□□□□ -1.6
HCN1O60741 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.08□□□□□ -1.6
HCN1O60741 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.08□□□□□ -1.6
HCN1O60741 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.08□□□□□ -1.6
HCN1O60741 AL596266.1-201ENST00000448132 400 ntBASIC5.08□□□□□ -1.6
HCN1O60741 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.08□□□□□ -1.6
HCN1O60741 MYO5BP2-201ENST00000449815 1277 ntBASIC5.08□□□□□ -1.6
HCN1O60741 AP000547.1-201ENST00000454360 617 ntBASIC5.08□□□□□ -1.6
HCN1O60741 RPS4XP12-201ENST00000461747 709 ntBASIC5.08□□□□□ -1.6
HCN1O60741 OR2AO1P-201ENST00000476497 403 ntBASIC5.08□□□□□ -1.6
HCN1O60741 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HCN1O60741 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.08□□□□□ -1.6
HCN1O60741 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.08□□□□□ -1.6
HCN1O60741 IGLV3-24-201ENST00000517477 197 ntBASIC5.08□□□□□ -1.6
HCN1O60741 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.08□□□□□ -1.6
HCN1O60741 HSPE1P2-201ENST00000554777 306 ntBASIC5.08□□□□□ -1.6
HCN1O60741 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.08□□□□□ -1.6
HCN1O60741 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HCN1O60741 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.08□□□□□ -1.6
HCN1O60741 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.08□□□□□ -1.6
HCN1O60741 QTRT1P1-201ENST00000604344 1078 ntBASIC5.08□□□□□ -1.6
HCN1O60741 AC007204.2-201ENST00000615022 616 ntBASIC5.08□□□□□ -1.6
HCN1O60741 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HCN1O60741 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.08□□□□□ -1.6
HCN1O60741 MIR6837-201ENST00000620884 64 ntBASIC5.08□□□□□ -1.6
HCN1O60741 AC006840.1-201ENST00000623069 542 ntBASIC5.08□□□□□ -1.6
HCN1O60741 AC132068.1-201ENST00000623805 459 ntBASIC5.08□□□□□ -1.6
HCN1O60741 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.08□□□□□ -1.6
HCN1O60741 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.08□□□□□ -1.6
HCN1O60741 SAMMSON-209ENST00000641222 1100 ntBASIC5.08□□□□□ -1.6
HCN1O60741 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.08□□□□□ -1.6
HCN1O60741 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.08□□□□□ -1.6
HCN1O60741 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HCN1O60741 SAMMSON-213ENST00000641336 1521 ntBASIC5.07□□□□□ -1.6
HCN1O60741 AC068870.1-201ENST00000563737 2455 ntBASIC5.07□□□□□ -1.6
HCN1O60741 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HCN1O60741 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HCN1O60741 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
HCN1O60741 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HCN1O60741 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
HCN1O60741 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
HCN1O60741 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.07□□□□□ -1.6
HCN1O60741 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.07□□□□□ -1.6
HCN1O60741 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HCN1O60741 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HCN1O60741 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HCN1O60741 OR9K1P-201ENST00000326513 941 ntBASIC5.07□□□□□ -1.6
HCN1O60741 RN7SKP28-201ENST00000364770 305 ntBASIC5.07□□□□□ -1.6
HCN1O60741 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.07□□□□□ -1.6
HCN1O60741 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.07□□□□□ -1.6
HCN1O60741 AC009804.1-201ENST00000400949 179 ntBASIC5.07□□□□□ -1.6
HCN1O60741 RN7SKP59-201ENST00000410520 314 ntBASIC5.07□□□□□ -1.6
HCN1O60741 AP000534.2-201ENST00000412729 568 ntBASIC5.07□□□□□ -1.6
HCN1O60741 Z93019.1-201ENST00000416450 973 ntBASIC5.07□□□□□ -1.6
HCN1O60741 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.07□□□□□ -1.6
HCN1O60741 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.07□□□□□ -1.6
HCN1O60741 VDAC2P4-201ENST00000452925 711 ntBASIC5.07□□□□□ -1.6
HCN1O60741 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HCN1O60741 RPL35AP19-201ENST00000469425 329 ntBASIC5.07□□□□□ -1.6
HCN1O60741 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.07□□□□□ -1.6
HCN1O60741 RPL7P39-201ENST00000481157 744 ntBASIC5.07□□□□□ -1.6
HCN1O60741 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.07□□□□□ -1.6
HCN1O60741 RN7SL547P-201ENST00000490793 290 ntBASIC5.07□□□□□ -1.6
HCN1O60741 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.07□□□□□ -1.6
HCN1O60741 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.07□□□□□ -1.6
HCN1O60741 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.07□□□□□ -1.6
HCN1O60741 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.07□□□□□ -1.6
HCN1O60741 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.07□□□□□ -1.6
HCN1O60741 RNU6-513P-201ENST00000516104 104 ntBASIC5.07□□□□□ -1.6
HCN1O60741 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.07□□□□□ -1.6
HCN1O60741 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.07□□□□□ -1.6
HCN1O60741 AC079064.1-201ENST00000528365 362 ntBASIC5.07□□□□□ -1.6
HCN1O60741 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.07□□□□□ -1.6
HCN1O60741 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HCN1O60741 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.07□□□□□ -1.6
HCN1O60741 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms