Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC005294.1-201ENST00000355509 281 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 MIR323A-201ENST00000362199 86 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 RNU1-146P-201ENST00000364015 165 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
UPK1AO00322 AC009804.1-201ENST00000400949 179 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 AC007738.1-201ENST00000413892 348 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 AC017078.1-201ENST00000416146 368 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 GAPDHP34-201ENST00000432112 823 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 RPS26P41-201ENST00000450370 284 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.94□□□□□ -1.62
UPK1AO00322 AC007386.1-201ENST00000455212 582 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 AC108161.1-201ENST00000461060 402 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 RPL7P40-201ENST00000481703 745 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 AL136038.1-201ENST00000497246 351 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.94□□□□□ -1.62
UPK1AO00322 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.94□□□□□ -1.62
UPK1AO00322 LDHBP3-201ENST00000514909 822 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 RNA5SP362-201ENST00000516048 118 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.94□□□□□ -1.62
UPK1AO00322 GTF2IP11-201ENST00000526931 420 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.94□□□□□ -1.62
UPK1AO00322 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.94□□□□□ -1.62
UPK1AO00322 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.94□□□□□ -1.62
UPK1AO00322 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.94□□□□□ -1.62
UPK1AO00322 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.94□□□□□ -1.62
UPK1AO00322 AC009597.2-201ENST00000604659 592 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.94□□□□□ -1.62
UPK1AO00322 BNIP3P41-202ENST00000616656 861 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 AC074101.1-201ENST00000637861 241 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 SAMMSON-209ENST00000641222 1100 ntBASIC4.94□□□□□ -1.62
UPK1AO00322 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
UPK1AO00322 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.94□□□□□ -1.62
UPK1AO00322 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.94□□□□□ -1.62
UPK1AO00322 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.94□□□□□ -1.62
UPK1AO00322 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPK1AO00322 OR55B1P-203ENST00000641518 2602 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1AO00322 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 AP001642.1-201ENST00000624727 2117 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1AO00322 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1AO00322 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1AO00322 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1AO00322 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1AO00322 RN7SKP74-201ENST00000362849 309 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1AO00322 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1AO00322 MIR105-1-201ENST00000385222 81 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 MIR589-201ENST00000385238 99 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 MIR143-201ENST00000385300 106 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.93□□□□□ -1.62
UPK1AO00322 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.93□□□□□ -1.62
UPK1AO00322 AL121776.1-201ENST00000429337 372 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 CLUHP1-201ENST00000435012 1190 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 RPS11P7-201ENST00000442125 465 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1AO00322 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.93□□□□□ -1.62
UPK1AO00322 AL133445.1-201ENST00000467051 452 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.93□□□□□ -1.62
UPK1AO00322 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.93□□□□□ -1.62
UPK1AO00322 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1AO00322 RNU6-941P-201ENST00000516346 108 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 IGLVIV-64-201ENST00000518581 301 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.93□□□□□ -1.62
UPK1AO00322 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
UPK1AO00322 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.93□□□□□ -1.62
UPK1AO00322 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1AO00322 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.93□□□□□ -1.62
UPK1AO00322 AC011840.5-201ENST00000582125 771 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.93□□□□□ -1.62
UPK1AO00322 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.93□□□□□ -1.62
UPK1AO00322 AC079395.2-201ENST00000610982 737 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPK1AO00322 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
UPK1AO00322 AC023421.1-201ENST00000590535 1785 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
UPK1AO00322 BRAFP1-201ENST00000445336 2703 ntBASIC4.93□□□□□ -1.62
UPK1AO00322 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.93□□□□□ -1.62
UPK1AO00322 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
UPK1AO00322 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.92□□□□□ -1.62
UPK1AO00322 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 AL731566.1-201ENST00000620490 1937 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 AC017079.1-201ENST00000333650 415 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 RNU1-149P-201ENST00000390870 161 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms