Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 AL353807.1-201ENST00000427475 662 ntBASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 AL049637.2-201ENST00000641778 930 ntBASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.99■□□□□ 0.95
SNX9Q9Y5X1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 AP001412.1-201ENST00000608405 714 ntBASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX9Q9Y5X1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 SNORA78-201ENST00000459373 127 ntBASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 AP002982.1-201ENST00000492365 877 ntBASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 C1QL1P1-201ENST00000568105 661 ntBASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 AC113410.3-201ENST00000623366 203 ntBASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 SLC25A24-204ENST00000569674 2357 ntBASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX9Q9Y5X1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 AC073130.3-201ENST00000624389 2278 ntBASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNX9Q9Y5X1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.95
SNX9Q9Y5X1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms