Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 AC125437.2-201ENST00000625180 2167 ntBASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.92■■□□□ 1.1
COL4A3BPQ9Y5P4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.91■■□□□ 1.1
COL4A3BPQ9Y5P4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 RPS2P55-201ENST00000397318 883 ntBASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 AC012618.2-201ENST00000428058 849 ntBASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 AC107956.1-201ENST00000494359 873 ntBASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL4A3BPQ9Y5P4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL4A3BPQ9Y5P4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
COL4A3BPQ9Y5P4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL4A3BPQ9Y5P4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL4A3BPQ9Y5P4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 RARRES2P10-201ENST00000564312 460 ntBASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 AC233702.5-201ENST00000584107 538 ntBASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
COL4A3BPQ9Y5P4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 TFP1-202ENST00000475455 1573 ntBASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 KRT16P5-201ENST00000455284 522 ntBASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL4A3BPQ9Y5P4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms