Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 AL031985.4-201ENST00000642138 673 ntBASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 AIRN-201ENST00000601203 4374 ntBASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00588Q9Y4M8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 UNC93B2-201ENST00000285383 730 ntBASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 RBM17P1-201ENST00000453646 1190 ntBASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 LINC01023-201ENST00000606054 436 ntBASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 AC133561.5-201ENST00000635547 218 ntBASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 AL157384.1-201ENST00000445995 2473 ntBASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00588Q9Y4M8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 AC099778.1-201ENST00000568593 1911 ntBASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 KRT8P8-201ENST00000434750 1448 ntBASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 MMP23A-201ENST00000234610 1017 ntBASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 AC116562.2-201ENST00000507042 360 ntBASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 AC131212.4-201ENST00000623606 975 ntBASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LINC00588Q9Y4M8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 AC004980.1-204ENST00000429707 299 ntBASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00588Q9Y4M8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms