Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
PKP3Q9Y446 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.66■□□□□ 0.74
PKP3Q9Y446 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.66■□□□□ 0.74
PKP3Q9Y446 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.66■□□□□ 0.74
PKP3Q9Y446 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.66■□□□□ 0.74
PKP3Q9Y446 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.66■□□□□ 0.74
PKP3Q9Y446 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.66■□□□□ 0.74
PKP3Q9Y446 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
PKP3Q9Y446 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.66■□□□□ 0.74
PKP3Q9Y446 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.66■□□□□ 0.74
PKP3Q9Y446 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.66■□□□□ 0.74
PKP3Q9Y446 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP3Q9Y446 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.65■□□□□ 0.74
PKP3Q9Y446 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.65■□□□□ 0.74
PKP3Q9Y446 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PKP3Q9Y446 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.65■□□□□ 0.74
PKP3Q9Y446 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PKP3Q9Y446 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PKP3Q9Y446 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PKP3Q9Y446 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PKP3Q9Y446 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PKP3Q9Y446 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PKP3Q9Y446 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.64■□□□□ 0.74
PKP3Q9Y446 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PKP3Q9Y446 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.74
PKP3Q9Y446 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.64■□□□□ 0.74
PKP3Q9Y446 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PKP3Q9Y446 YBX1P10-201ENST00000444752 975 ntBASIC19.64■□□□□ 0.73
PKP3Q9Y446 TSPY20P-201ENST00000450910 630 ntBASIC19.64■□□□□ 0.73
PKP3Q9Y446 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PKP3Q9Y446 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.64■□□□□ 0.73
PKP3Q9Y446 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.64■□□□□ 0.73
PKP3Q9Y446 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.64■□□□□ 0.73
PKP3Q9Y446 MTDHP1-201ENST00000605323 784 ntBASIC19.64■□□□□ 0.73
PKP3Q9Y446 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PKP3Q9Y446 AC073648.6-201ENST00000641589 218 ntBASIC19.64■□□□□ 0.73
PKP3Q9Y446 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PKP3Q9Y446 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.64■□□□□ 0.73
PKP3Q9Y446 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PKP3Q9Y446 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PKP3Q9Y446 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PKP3Q9Y446 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PKP3Q9Y446 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP3Q9Y446 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.63■□□□□ 0.73
PKP3Q9Y446 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.63■□□□□ 0.73
PKP3Q9Y446 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
PKP3Q9Y446 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP3Q9Y446 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP3Q9Y446 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PKP3Q9Y446 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
PKP3Q9Y446 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP3Q9Y446 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.63■□□□□ 0.73
PKP3Q9Y446 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP3Q9Y446 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP3Q9Y446 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PKP3Q9Y446 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.63■□□□□ 0.73
PKP3Q9Y446 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.63■□□□□ 0.73
PKP3Q9Y446 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.63■□□□□ 0.73
PKP3Q9Y446 AC233263.1-201ENST00000578059 224 ntBASIC19.63■□□□□ 0.73
PKP3Q9Y446 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP3Q9Y446 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PKP3Q9Y446 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP3Q9Y446 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP3Q9Y446 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP3Q9Y446 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKP3Q9Y446 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PKP3Q9Y446 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP3Q9Y446 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PKP3Q9Y446 AC125437.2-201ENST00000625180 2167 ntBASIC19.62■□□□□ 0.73
PKP3Q9Y446 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP3Q9Y446 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKP3Q9Y446 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms