Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC26.83■■□□□ 1.89
NINLQ9Y2I6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
NINLQ9Y2I6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NINLQ9Y2I6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
NINLQ9Y2I6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NINLQ9Y2I6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.88
NINLQ9Y2I6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC26.83■■□□□ 1.88
NINLQ9Y2I6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC26.83■■□□□ 1.88
NINLQ9Y2I6 AP000692.2-201ENST00000608391 879 ntBASIC26.83■■□□□ 1.88
NINLQ9Y2I6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
NINLQ9Y2I6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NINLQ9Y2I6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
NINLQ9Y2I6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
NINLQ9Y2I6 AC004951.3-201ENST00000418645 1148 ntBASIC26.82■■□□□ 1.88
NINLQ9Y2I6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC26.82■■□□□ 1.88
NINLQ9Y2I6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC26.82■■□□□ 1.88
NINLQ9Y2I6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NINLQ9Y2I6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NINLQ9Y2I6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
NINLQ9Y2I6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC26.81■■□□□ 1.88
NINLQ9Y2I6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
NINLQ9Y2I6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
NINLQ9Y2I6 CYP2D8P-201ENST00000433633 1490 ntBASIC26.8■■□□□ 1.88
NINLQ9Y2I6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NINLQ9Y2I6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
NINLQ9Y2I6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NINLQ9Y2I6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC26.8■■□□□ 1.88
NINLQ9Y2I6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
NINLQ9Y2I6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC26.8■■□□□ 1.88
NINLQ9Y2I6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
NINLQ9Y2I6 AC011298.2-201ENST00000617989 482 ntBASIC26.8■■□□□ 1.88
NINLQ9Y2I6 AC099778.1-201ENST00000568593 1911 ntBASIC26.8■■□□□ 1.88
NINLQ9Y2I6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC26.8■■□□□ 1.88
NINLQ9Y2I6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC26.8■■□□□ 1.88
NINLQ9Y2I6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 AC130371.2-201ENST00000619443 611 ntBASIC26.79■■□□□ 1.88
NINLQ9Y2I6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC26.79■■□□□ 1.88
NINLQ9Y2I6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 C2orf69P3-201ENST00000565542 1120 ntBASIC26.78■■□□□ 1.88
NINLQ9Y2I6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 AC092865.7-201ENST00000641832 219 ntBASIC26.78■■□□□ 1.88
NINLQ9Y2I6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
NINLQ9Y2I6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 AC113347.1-201ENST00000413321 391 ntBASIC26.77■■□□□ 1.88
NINLQ9Y2I6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC26.77■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms