Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.8■□□□□ 0.6
CNOT11Q9UKZ1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.79■□□□□ 0.6
CNOT11Q9UKZ1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 BX119927.1-201ENST00000636596 1552 ntBASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 KRT18P68-201ENST00000392293 1000 ntBASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 LSM12P1-201ENST00000411836 588 ntBASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNOT11Q9UKZ1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.77■□□□□ 0.6
CNOT11Q9UKZ1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNOT11Q9UKZ1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNOT11Q9UKZ1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
CNOT11Q9UKZ1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CNOT11Q9UKZ1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 AC020916.1-201ENST00000587762 1774 ntBASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 DUSP5P2-201ENST00000426873 1033 ntBASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 AC091874.3-201ENST00000512672 1195 ntBASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 AL589743.5-201ENST00000616611 1050 ntBASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 MYC-209ENST00000641252 345 ntBASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT11Q9UKZ1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms