Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC128688.1-201ENST00000487626 519 ntBASIC20.47■□□□□ 0.87
DNMT3BQ9UBC3 FAM87A-204ENST00000613235 858 ntBASIC20.47■□□□□ 0.87
DNMT3BQ9UBC3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.47■□□□□ 0.87
DNMT3BQ9UBC3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DNMT3BQ9UBC3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
DNMT3BQ9UBC3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 AC004951.3-201ENST00000418645 1148 ntBASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 WWOX-216ENST00000569818 525 ntBASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3BQ9UBC3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
DNMT3BQ9UBC3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3BQ9UBC3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
DNMT3BQ9UBC3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3BQ9UBC3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 BX119927.1-201ENST00000636596 1552 ntBASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3BQ9UBC3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms