Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 RN7SL471P-201ENST00000580476 299 ntBASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 AL023875.1-201ENST00000640777 796 ntBASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
BLOC1S4Q9NUP1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 NBPF21P-201ENST00000425093 1451 ntBASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 AC005332.7-201ENST00000614046 2005 ntBASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.8■■□□□ 1.08
BLOC1S4Q9NUP1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 PRKY-204ENST00000533551 1019 ntBASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 KRT8P8-201ENST00000434750 1448 ntBASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BLOC1S4Q9NUP1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BLOC1S4Q9NUP1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms