Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHB16Q9NRJ7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 AP000974.1-201ENST00000623909 2387 ntBASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 AL162430.1-201ENST00000480705 870 ntBASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB16Q9NRJ7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 AC137761.2-201ENST00000561729 223 ntBASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 AC145350.3-201ENST00000569033 163 ntBASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 MFSD11-216ENST00000590393 1141 ntBASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 AL031963.3-201ENST00000606441 850 ntBASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB16Q9NRJ7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 RARRES2P4-201ENST00000514074 484 ntBASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 AC008694.1-202ENST00000636953 945 ntBASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 AP001271.2-201ENST00000624018 1556 ntBASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PCDHB16Q9NRJ7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHB16Q9NRJ7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms