Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 AP006587.1-201ENST00000534129 1502 ntBASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 TREX1-205ENST00000625293 1783 ntBASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.52■□□□□ 0.56
PRDM9Q9NQV7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRDM9Q9NQV7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PRDM9Q9NQV7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRDM9Q9NQV7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRDM9Q9NQV7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 AC125437.2-201ENST00000625180 2167 ntBASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRDM9Q9NQV7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 AC004264.1-201ENST00000608354 794 ntBASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 AP006294.2-201ENST00000641667 209 ntBASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRDM9Q9NQV7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.49■□□□□ 0.55
PRDM9Q9NQV7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.48■□□□□ 0.55
PRDM9Q9NQV7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.48■□□□□ 0.55
PRDM9Q9NQV7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRDM9Q9NQV7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRDM9Q9NQV7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PRDM9Q9NQV7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRDM9Q9NQV7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRDM9Q9NQV7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRDM9Q9NQV7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms