Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN3Q9NQS3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 POM121L13P-201ENST00000422362 380 ntBASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 AC128676.1-201ENST00000454392 318 ntBASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 AC233263.1-201ENST00000578059 224 ntBASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 ITM2C-210ENST00000620962 501 ntBASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.74■□□□□ 0.59
NECTIN3Q9NQS3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 TNXA-203ENST00000507684 2038 ntBASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 KRT18P29-201ENST00000397031 1267 ntBASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 AC073648.6-201ENST00000641589 218 ntBASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NECTIN3Q9NQS3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 AC124283.5-201ENST00000624661 1809 ntBASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 KRT17P3-201ENST00000420566 1262 ntBASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 RPS2P52-201ENST00000469610 820 ntBASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 TMEM191A-211ENST00000637163 1067 ntBASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 AC099778.1-201ENST00000568593 1911 ntBASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.72■□□□□ 0.59
NECTIN3Q9NQS3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms