Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.97■□□□□ 0.31
C12orf4Q9NQ89 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 PCDHB18P-201ENST00000524813 2368 ntBASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 YBX1P1-201ENST00000445822 960 ntBASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 TNRC18P3-201ENST00000441896 2691 ntBASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
C12orf4Q9NQ89 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
C12orf4Q9NQ89 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
C12orf4Q9NQ89 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
C12orf4Q9NQ89 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.96■□□□□ 0.3
C12orf4Q9NQ89 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
C12orf4Q9NQ89 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 AC097381.1-201ENST00000429019 1296 ntBASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 CDV3P1-201ENST00000471403 739 ntBASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 AL049812.1-201ENST00000432563 2267 ntBASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C12orf4Q9NQ89 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 PGM5P4-201ENST00000421970 445 ntBASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms