Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SNORA78-201ENST00000459373 127 ntBASIC20.52■□□□□ 0.88
CD248Q9HCU0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.52■□□□□ 0.88
CD248Q9HCU0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CD248Q9HCU0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.52■□□□□ 0.88
CD248Q9HCU0 AC233702.5-201ENST00000584107 538 ntBASIC20.52■□□□□ 0.88
CD248Q9HCU0 AC006557.6-201ENST00000623071 864 ntBASIC20.52■□□□□ 0.88
CD248Q9HCU0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD248Q9HCU0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CD248Q9HCU0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD248Q9HCU0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CD248Q9HCU0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD248Q9HCU0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CD248Q9HCU0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CD248Q9HCU0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.51■□□□□ 0.87
CD248Q9HCU0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CD248Q9HCU0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.51■□□□□ 0.87
CD248Q9HCU0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
CD248Q9HCU0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.51■□□□□ 0.87
CD248Q9HCU0 AC012618.2-201ENST00000428058 849 ntBASIC20.51■□□□□ 0.87
CD248Q9HCU0 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.51■□□□□ 0.87
CD248Q9HCU0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.51■□□□□ 0.87
CD248Q9HCU0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CD248Q9HCU0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CD248Q9HCU0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD248Q9HCU0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.5■□□□□ 0.87
CD248Q9HCU0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CD248Q9HCU0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CD248Q9HCU0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.5■□□□□ 0.87
CD248Q9HCU0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.5■□□□□ 0.87
CD248Q9HCU0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.5■□□□□ 0.87
CD248Q9HCU0 AL023875.1-201ENST00000640777 796 ntBASIC20.5■□□□□ 0.87
CD248Q9HCU0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.5■□□□□ 0.87
CD248Q9HCU0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 AC011484.1-201ENST00000377652 1995 ntBASIC20.5■□□□□ 0.87
CD248Q9HCU0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CD248Q9HCU0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CD248Q9HCU0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD248Q9HCU0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD248Q9HCU0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD248Q9HCU0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD248Q9HCU0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD248Q9HCU0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD248Q9HCU0 RPS2P55-201ENST00000397318 883 ntBASIC20.49■□□□□ 0.87
CD248Q9HCU0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 AC107956.1-201ENST00000494359 873 ntBASIC20.49■□□□□ 0.87
CD248Q9HCU0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD248Q9HCU0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD248Q9HCU0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.49■□□□□ 0.87
CD248Q9HCU0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CD248Q9HCU0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD248Q9HCU0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD248Q9HCU0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CD248Q9HCU0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.48■□□□□ 0.87
CD248Q9HCU0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD248Q9HCU0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD248Q9HCU0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD248Q9HCU0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD248Q9HCU0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD248Q9HCU0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CD248Q9HCU0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.48■□□□□ 0.87
CD248Q9HCU0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD248Q9HCU0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.48■□□□□ 0.87
CD248Q9HCU0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms