Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 NUDT16P1-203ENST00000513809 620 ntBASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 AC004980.1-204ENST00000429707 299 ntBASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1G1Q9HCP0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 AC116562.2-201ENST00000507042 360 ntBASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G1Q9HCP0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CSNK1G1Q9HCP0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CSNK1G1Q9HCP0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CSNK1G1Q9HCP0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 AP003071.4-201ENST00000562276 1284 ntBASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 AC026271.3-201ENST00000571884 352 ntBASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 AL031985.4-201ENST00000642138 673 ntBASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G1Q9HCP0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 AL355355.2-201ENST00000442321 338 ntBASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G1Q9HCP0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G1Q9HCP0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G1Q9HCP0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.49■□□□□ 0.87
CSNK1G1Q9HCP0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G1Q9HCP0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G1Q9HCP0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G1Q9HCP0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.49■□□□□ 0.87
CSNK1G1Q9HCP0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G1Q9HCP0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms