Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 AC090192.1-201ENST00000517740 490 ntBASIC17.07■□□□□ 0.32
ELL3Q9HB65 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.07■□□□□ 0.32
ELL3Q9HB65 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.07■□□□□ 0.32
ELL3Q9HB65 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ELL3Q9HB65 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.07■□□□□ 0.32
ELL3Q9HB65 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.07■□□□□ 0.32
ELL3Q9HB65 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ELL3Q9HB65 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ELL3Q9HB65 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.07■□□□□ 0.32
ELL3Q9HB65 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ELL3Q9HB65 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ELL3Q9HB65 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ELL3Q9HB65 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ELL3Q9HB65 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ELL3Q9HB65 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ELL3Q9HB65 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ELL3Q9HB65 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.06■□□□□ 0.32
ELL3Q9HB65 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.06■□□□□ 0.32
ELL3Q9HB65 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
ELL3Q9HB65 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
ELL3Q9HB65 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
ELL3Q9HB65 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ELL3Q9HB65 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 AC006970.2-201ENST00000450065 779 ntBASIC17.06■□□□□ 0.32
ELL3Q9HB65 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.06■□□□□ 0.32
ELL3Q9HB65 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.06■□□□□ 0.32
ELL3Q9HB65 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ELL3Q9HB65 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ELL3Q9HB65 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.06■□□□□ 0.32
ELL3Q9HB65 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.06■□□□□ 0.32
ELL3Q9HB65 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ELL3Q9HB65 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ELL3Q9HB65 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ELL3Q9HB65 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ELL3Q9HB65 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ELL3Q9HB65 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ELL3Q9HB65 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ELL3Q9HB65 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ELL3Q9HB65 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ELL3Q9HB65 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.04■□□□□ 0.32
ELL3Q9HB65 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ELL3Q9HB65 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ELL3Q9HB65 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ELL3Q9HB65 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ELL3Q9HB65 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.04■□□□□ 0.32
ELL3Q9HB65 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.04■□□□□ 0.32
ELL3Q9HB65 AC093787.1-201ENST00000450396 207 ntBASIC17.04■□□□□ 0.32
ELL3Q9HB65 RARRES2P4-201ENST00000514074 484 ntBASIC17.04■□□□□ 0.32
ELL3Q9HB65 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.04■□□□□ 0.32
ELL3Q9HB65 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.04■□□□□ 0.32
ELL3Q9HB65 AL162412.1-201ENST00000567129 965 ntBASIC17.04■□□□□ 0.32
ELL3Q9HB65 AC069236.1-201ENST00000604339 616 ntBASIC17.04■□□□□ 0.32
ELL3Q9HB65 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.04■□□□□ 0.32
ELL3Q9HB65 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.04■□□□□ 0.32
ELL3Q9HB65 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.04■□□□□ 0.32
ELL3Q9HB65 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ELL3Q9HB65 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
ELL3Q9HB65 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.04■□□□□ 0.32
ELL3Q9HB65 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ELL3Q9HB65 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ELL3Q9HB65 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms