Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX47Q9H0S4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX47Q9H0S4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX47Q9H0S4 AC068338.2-201ENST00000563278 1430 ntBASIC20.36■□□□□ 0.85
DDX47Q9H0S4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 CNN2P6-201ENST00000439038 900 ntBASIC20.36■□□□□ 0.85
DDX47Q9H0S4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX47Q9H0S4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 AL355472.2-201ENST00000422958 438 ntBASIC20.35■□□□□ 0.85
DDX47Q9H0S4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 AC020763.4-201ENST00000623414 4170 ntBASIC20.35■□□□□ 0.85
DDX47Q9H0S4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX47Q9H0S4 AC104581.1-202ENST00000635932 2618 ntBASIC20.35■□□□□ 0.85
DDX47Q9H0S4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX47Q9H0S4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms