Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMD4Q96H15 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.46■□□□□ 0.23
TIMD4Q96H15 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TIMD4Q96H15 AC073314.1-201ENST00000568729 2216 ntBASIC16.46■□□□□ 0.23
TIMD4Q96H15 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.46■□□□□ 0.23
TIMD4Q96H15 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.46■□□□□ 0.23
TIMD4Q96H15 AP005212.1-201ENST00000581547 1997 ntBASIC16.46■□□□□ 0.23
TIMD4Q96H15 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
TIMD4Q96H15 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMD4Q96H15 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMD4Q96H15 NIFKP9-201ENST00000419265 221 ntBASIC16.46■□□□□ 0.23
TIMD4Q96H15 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.46■□□□□ 0.23
TIMD4Q96H15 KRT18P16-201ENST00000510337 1294 ntBASIC16.46■□□□□ 0.23
TIMD4Q96H15 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TIMD4Q96H15 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TIMD4Q96H15 C1QL1P1-201ENST00000568105 661 ntBASIC16.46■□□□□ 0.23
TIMD4Q96H15 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TIMD4Q96H15 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.46■□□□□ 0.23
TIMD4Q96H15 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.46■□□□□ 0.23
TIMD4Q96H15 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.46■□□□□ 0.23
TIMD4Q96H15 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMD4Q96H15 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TIMD4Q96H15 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMD4Q96H15 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TIMD4Q96H15 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.46■□□□□ 0.23
TIMD4Q96H15 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TIMD4Q96H15 GABARAPL3-202ENST00000624044 1851 ntBASIC16.46■□□□□ 0.22
TIMD4Q96H15 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TIMD4Q96H15 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TIMD4Q96H15 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMD4Q96H15 KRT16P1-201ENST00000399124 1418 ntBASIC16.45■□□□□ 0.22
TIMD4Q96H15 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMD4Q96H15 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMD4Q96H15 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMD4Q96H15 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMD4Q96H15 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMD4Q96H15 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMD4Q96H15 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMD4Q96H15 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMD4Q96H15 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 AC073912.3-201ENST00000624414 853 ntBASIC16.45■□□□□ 0.22
TIMD4Q96H15 CR392000.1-201ENST00000624770 1228 ntBASIC16.45■□□□□ 0.22
TIMD4Q96H15 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMD4Q96H15 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMD4Q96H15 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMD4Q96H15 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TIMD4Q96H15 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMD4Q96H15 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TIMD4Q96H15 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMD4Q96H15 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMD4Q96H15 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TIMD4Q96H15 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TIMD4Q96H15 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TIMD4Q96H15 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.44■□□□□ 0.22
TIMD4Q96H15 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.44■□□□□ 0.22
TIMD4Q96H15 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.44■□□□□ 0.22
TIMD4Q96H15 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.44■□□□□ 0.22
TIMD4Q96H15 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMD4Q96H15 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.44■□□□□ 0.22
TIMD4Q96H15 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMD4Q96H15 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TIMD4Q96H15 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMD4Q96H15 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.44■□□□□ 0.22
TIMD4Q96H15 FEM1AP1-201ENST00000431297 1995 ntBASIC16.44■□□□□ 0.22
TIMD4Q96H15 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.44■□□□□ 0.22
TIMD4Q96H15 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TIMD4Q96H15 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMD4Q96H15 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TIMD4Q96H15 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMD4Q96H15 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.43■□□□□ 0.22
TIMD4Q96H15 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMD4Q96H15 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMD4Q96H15 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
TIMD4Q96H15 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TIMD4Q96H15 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TIMD4Q96H15 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.43■□□□□ 0.22
TIMD4Q96H15 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.43■□□□□ 0.22
TIMD4Q96H15 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.43■□□□□ 0.22
TIMD4Q96H15 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TIMD4Q96H15 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TIMD4Q96H15 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.43■□□□□ 0.22
TIMD4Q96H15 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.43■□□□□ 0.22
TIMD4Q96H15 AP003071.4-201ENST00000562276 1284 ntBASIC16.43■□□□□ 0.22
TIMD4Q96H15 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TIMD4Q96H15 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMD4Q96H15 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMD4Q96H15 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMD4Q96H15 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms