Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTHRC1Q96CG8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTHRC1Q96CG8 KRASP1-201ENST00000407852 552 ntBASIC18.19■□□□□ 0.5
CTHRC1Q96CG8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.19■□□□□ 0.5
CTHRC1Q96CG8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.19■□□□□ 0.5
CTHRC1Q96CG8 AC110285.5-201ENST00000611501 352 ntBASIC18.19■□□□□ 0.5
CTHRC1Q96CG8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTHRC1Q96CG8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.19■□□□□ 0.5
CTHRC1Q96CG8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTHRC1Q96CG8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CTHRC1Q96CG8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 AC004264.1-201ENST00000608354 794 ntBASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTHRC1Q96CG8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 PRORSD1P-201ENST00000295112 541 ntBASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 KRT18P29-201ENST00000397031 1267 ntBASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 KRT16P5-201ENST00000455284 522 ntBASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 RPPH1-201ENST00000516869 333 ntBASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 AC093484.2-201ENST00000580996 2166 ntBASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.17■□□□□ 0.5
CTHRC1Q96CG8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 C1QBPP2-201ENST00000528754 825 ntBASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 C1QL1P1-201ENST00000568105 661 ntBASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 Z82202.1-201ENST00000623446 1880 ntBASIC18.16■□□□□ 0.5
CTHRC1Q96CG8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms