Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A3Q93084 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A3Q93084 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A3Q93084 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A3Q93084 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A3Q93084 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A3Q93084 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
ATP2A3Q93084 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A3Q93084 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A3Q93084 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A3Q93084 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 HTR7P1-201ENST00000538670 1336 ntBASIC20.61■□□□□ 0.89
ATP2A3Q93084 AL391422.3-201ENST00000603791 2761 ntBASIC20.61■□□□□ 0.89
ATP2A3Q93084 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A3Q93084 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A3Q93084 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 AF186192.3-201ENST00000583427 947 ntBASIC20.61■□□□□ 0.89
ATP2A3Q93084 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A3Q93084 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A3Q93084 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A3Q93084 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP2A3Q93084 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A3Q93084 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A3Q93084 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP2A3Q93084 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A3Q93084 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATP2A3Q93084 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A3Q93084 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ATP2A3Q93084 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A3Q93084 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ATP2A3Q93084 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A3Q93084 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP2A3Q93084 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP2A3Q93084 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP2A3Q93084 AC004264.1-201ENST00000608354 794 ntBASIC20.6■□□□□ 0.89
ATP2A3Q93084 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP2A3Q93084 AC138932.1-201ENST00000534164 6830 ntBASIC20.6■□□□□ 0.89
ATP2A3Q93084 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A3Q93084 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A3Q93084 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ATP2A3Q93084 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ATP2A3Q93084 KRT8P20-201ENST00000423953 1409 ntBASIC20.6■□□□□ 0.89
ATP2A3Q93084 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A3Q93084 PTBP1P-201ENST00000554374 1601 ntBASIC20.6■□□□□ 0.89
ATP2A3Q93084 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A3Q93084 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A3Q93084 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A3Q93084 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A3Q93084 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A3Q93084 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A3Q93084 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A3Q93084 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A3Q93084 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.59■□□□□ 0.89
ATP2A3Q93084 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A3Q93084 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 AL031963.3-201ENST00000606441 850 ntBASIC20.59■□□□□ 0.89
ATP2A3Q93084 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A3Q93084 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ATP2A3Q93084 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A3Q93084 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP2A3Q93084 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A3Q93084 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ATP2A3Q93084 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A3Q93084 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A3Q93084 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP2A3Q93084 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ATP2A3Q93084 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP2A3Q93084 AL355075.4-201ENST00000554988 638 ntBASIC20.58■□□□□ 0.89
ATP2A3Q93084 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms