Protein–RNA interactions for Protein: Q8WWY3

PRPF31, U4/U6 small nuclear ribonucleoprotein Prp31, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF31Q8WWY3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 AL355075.4-201ENST00000554988 638 ntBASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRPF31Q8WWY3 AC112907.3-201ENST00000577781 2400 ntBASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 AC009237.14-201ENST00000609975 1594 ntBASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 SLC25A24-204ENST00000569674 2357 ntBASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRPF31Q8WWY3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 NUDT16P1-203ENST00000513809 620 ntBASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 KRT16P1-201ENST00000399124 1418 ntBASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRPF31Q8WWY3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 BX088651.1-201ENST00000540551 451 ntBASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 TCF3P1-201ENST00000423021 1937 ntBASIC21.59■■□□□ 1.05
PRPF31Q8WWY3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 AL445675.2-201ENST00000620291 557 ntBASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 REXO1L12P-201ENST00000622156 912 ntBASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 AC073912.3-201ENST00000624414 853 ntBASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRPF31Q8WWY3 LINC01521-201ENST00000504184 1943 ntBASIC21.58■■□□□ 1.04
PRPF31Q8WWY3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRPF31Q8WWY3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.57■■□□□ 1.04
PRPF31Q8WWY3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF31Q8WWY3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PRPF31Q8WWY3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PRPF31Q8WWY3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.57■■□□□ 1.04
PRPF31Q8WWY3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF31Q8WWY3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF31Q8WWY3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF31Q8WWY3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF31Q8WWY3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.57■■□□□ 1.04
PRPF31Q8WWY3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF31Q8WWY3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms