Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 AC009237.14-201ENST00000609975 1594 ntBASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.3■■□□□ 1.32
SH3RF3Q8TEJ3 LINC01465-201ENST00000408887 1940 ntBASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 AC097488.1-201ENST00000507834 756 ntBASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 RN7SL850P-201ENST00000579959 291 ntBASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH3RF3Q8TEJ3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 Z85996.1-201ENST00000494644 937 ntBASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 DGCR10-201ENST00000609839 495 ntBASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 AC010331.1-201ENST00000611423 582 ntBASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 AC011298.2-201ENST00000617989 482 ntBASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SH3RF3Q8TEJ3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 CRYGFP-201ENST00000418459 633 ntBASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SH3RF3Q8TEJ3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 AC004951.3-201ENST00000418645 1148 ntBASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 AP005242.2-201ENST00000580065 1175 ntBASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH3RF3Q8TEJ3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH3RF3Q8TEJ3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SH3RF3Q8TEJ3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms