Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 AC137761.2-201ENST00000561729 223 ntBASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 AC145350.3-201ENST00000569033 163 ntBASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.14■□□□□ 0.33
RPS4Y2Q8TD47 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 C2orf69P4-201ENST00000565394 541 ntBASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS4Y2Q8TD47 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 AC116351.2-201ENST00000606540 1585 ntBASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 DUX4L16-201ENST00000555130 1264 ntBASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 AL049812.1-201ENST00000432563 2267 ntBASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 AC018553.1-201ENST00000616682 1458 ntBASIC17.12■□□□□ 0.33
RPS4Y2Q8TD47 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.11■□□□□ 0.33
RPS4Y2Q8TD47 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms