Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHD6Q8TD26 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHD6Q8TD26 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHD6Q8TD26 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHD6Q8TD26 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHD6Q8TD26 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHD6Q8TD26 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 AC007274.1-201ENST00000439805 662 ntBASIC17.78■□□□□ 0.44
CHD6Q8TD26 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.78■□□□□ 0.44
CHD6Q8TD26 AL035252.4-201ENST00000624174 288 ntBASIC17.78■□□□□ 0.44
CHD6Q8TD26 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHD6Q8TD26 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHD6Q8TD26 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHD6Q8TD26 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHD6Q8TD26 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHD6Q8TD26 AC093525.10-201ENST00000625130 1569 ntBASIC17.78■□□□□ 0.44
CHD6Q8TD26 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHD6Q8TD26 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.78■□□□□ 0.44
CHD6Q8TD26 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.77■□□□□ 0.44
CHD6Q8TD26 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.77■□□□□ 0.44
CHD6Q8TD26 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHD6Q8TD26 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHD6Q8TD26 AC211486.1-202ENST00000416371 468 ntBASIC17.77■□□□□ 0.44
CHD6Q8TD26 AF186996.4-201ENST00000467186 377 ntBASIC17.77■□□□□ 0.44
CHD6Q8TD26 AC211476.1-201ENST00000503899 468 ntBASIC17.77■□□□□ 0.44
CHD6Q8TD26 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHD6Q8TD26 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHD6Q8TD26 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHD6Q8TD26 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHD6Q8TD26 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHD6Q8TD26 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHD6Q8TD26 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.77■□□□□ 0.43
CHD6Q8TD26 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.77■□□□□ 0.43
CHD6Q8TD26 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.77■□□□□ 0.43
CHD6Q8TD26 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.77■□□□□ 0.43
CHD6Q8TD26 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHD6Q8TD26 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.76■□□□□ 0.43
CHD6Q8TD26 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.76■□□□□ 0.43
CHD6Q8TD26 MIR3687-2-201ENST00000577708 61 ntBASIC17.76■□□□□ 0.43
CHD6Q8TD26 MIR3687-1-201ENST00000614492 61 ntBASIC17.76■□□□□ 0.43
CHD6Q8TD26 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHD6Q8TD26 AC092068.2-201ENST00000590491 1708 ntBASIC17.76■□□□□ 0.43
CHD6Q8TD26 AC139530.1-201ENST00000575312 1977 ntBASIC17.76■□□□□ 0.43
CHD6Q8TD26 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHD6Q8TD26 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.76■□□□□ 0.43
CHD6Q8TD26 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.76■□□□□ 0.43
CHD6Q8TD26 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CHD6Q8TD26 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.75■□□□□ 0.43
CHD6Q8TD26 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.75■□□□□ 0.43
CHD6Q8TD26 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.75■□□□□ 0.43
CHD6Q8TD26 AL136038.4-201ENST00000603606 1261 ntBASIC17.75■□□□□ 0.43
CHD6Q8TD26 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.75■□□□□ 0.43
CHD6Q8TD26 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.75■□□□□ 0.43
CHD6Q8TD26 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHD6Q8TD26 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.75■□□□□ 0.43
CHD6Q8TD26 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 LINC00265-3P-201ENST00000447588 903 ntBASIC17.75■□□□□ 0.43
CHD6Q8TD26 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
CHD6Q8TD26 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD6Q8TD26 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHD6Q8TD26 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.74■□□□□ 0.43
CHD6Q8TD26 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CHD6Q8TD26 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHD6Q8TD26 AP006288.1-201ENST00000446065 395 ntBASIC17.74■□□□□ 0.43
CHD6Q8TD26 DNAJB3-201ENST00000446806 729 ntBASIC17.74■□□□□ 0.43
CHD6Q8TD26 KRT8P26-201ENST00000534154 1276 ntBASIC17.74■□□□□ 0.43
CHD6Q8TD26 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.74■□□□□ 0.43
CHD6Q8TD26 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.74■□□□□ 0.43
CHD6Q8TD26 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.74■□□□□ 0.43
CHD6Q8TD26 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.74■□□□□ 0.43
CHD6Q8TD26 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.74■□□□□ 0.43
CHD6Q8TD26 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHD6Q8TD26 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHD6Q8TD26 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHD6Q8TD26 YBX2P1-201ENST00000394192 760 ntBASIC17.74■□□□□ 0.43
CHD6Q8TD26 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.74■□□□□ 0.43
CHD6Q8TD26 AC034232.1-201ENST00000506026 1064 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms