Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 AC243732.1-201ENST00000612648 864 ntBASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 WIZP1-201ENST00000531444 2299 ntBASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 AC096631.2-201ENST00000436136 790 ntBASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 AP001330.3-201ENST00000520123 633 ntBASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 KRT8P17-201ENST00000453110 1448 ntBASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CNIH3Q8TBE1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 AC090164.3-201ENST00000610780 2143 ntBASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 KRT16P6-202ENST00000425692 1426 ntBASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNIH3Q8TBE1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 PBX2P1-201ENST00000493219 1291 ntBASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 AP001160.3-201ENST00000601484 763 ntBASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 AC104187.1-201ENST00000607510 612 ntBASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 AL354811.1-201ENST00000610286 706 ntBASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 AC087633.2-202ENST00000565166 1439 ntBASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNIH3Q8TBE1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms