Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNIP1Q8TAD8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 AC005332.1-201ENST00000577698 1310 ntBASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 AC092338.2-201ENST00000568827 1415 ntBASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 AC004951.3-201ENST00000418645 1148 ntBASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 TUBB8P6-201ENST00000436895 1288 ntBASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNIP1Q8TAD8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 ECEL1P1-201ENST00000373592 1742 ntBASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNIP1Q8TAD8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 AC008622.2-201ENST00000617006 1229 ntBASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNIP1Q8TAD8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 TSPY17P-201ENST00000450329 467 ntBASIC18.46■□□□□ 0.55
SNIP1Q8TAD8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms