Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 KRT18P61-201ENST00000585825 1298 ntBASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 AC005082.1-201ENST00000413042 2259 ntBASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 AC093503.3-201ENST00000624917 2352 ntBASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01561Q8N1V8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 AIRN-201ENST00000601203 4374 ntBASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 MIR638-201ENST00000385237 100 ntBASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 AC008694.1-202ENST00000636953 945 ntBASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 AC068338.2-201ENST00000563278 1430 ntBASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01561Q8N1V8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 NTF6G-201ENST00000591094 616 ntBASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01561Q8N1V8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 AC116351.2-201ENST00000606540 1585 ntBASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 AC141586.3-201ENST00000562166 1838 ntBASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 AC034268.1-201ENST00000441047 882 ntBASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01561Q8N1V8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms