Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 TSPY5P-201ENST00000426936 936 ntBASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 AC091076.1-201ENST00000610741 619 ntBASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 AL121956.5-201ENST00000625261 221 ntBASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL27A1Q8IZC6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 AL353719.1-201ENST00000566847 864 ntBASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 PCED1CP-201ENST00000419887 785 ntBASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 BX664615.1-201ENST00000443558 458 ntBASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 AL160286.2-201ENST00000567150 934 ntBASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL27A1Q8IZC6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 LINC01465-201ENST00000408887 1940 ntBASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 AC011558.1-201ENST00000623459 338 ntBASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.53■□□□□ 0.56
COL27A1Q8IZC6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 AC079834.2-201ENST00000609776 1949 ntBASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL27A1Q8IZC6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.52■□□□□ 0.55
COL27A1Q8IZC6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL27A1Q8IZC6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL27A1Q8IZC6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.52■□□□□ 0.55
COL27A1Q8IZC6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.52■□□□□ 0.55
COL27A1Q8IZC6 AC069148.1-201ENST00000608741 768 ntBASIC18.52■□□□□ 0.55
COL27A1Q8IZC6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.52■□□□□ 0.55
COL27A1Q8IZC6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL27A1Q8IZC6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
COL27A1Q8IZC6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL27A1Q8IZC6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL27A1Q8IZC6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms