Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 KRT18P6-201ENST00000555540 1265 ntBASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 RNF165-205ENST00000588679 2904 ntBASIC18.46■□□□□ 0.55
CCDC116Q8IYX3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
CCDC116Q8IYX3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 AL121906.2-201ENST00000621597 723 ntBASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC116Q8IYX3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 AC008403.3-201ENST00000598924 454 ntBASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 AC007952.6-201ENST00000573168 2673 ntBASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 AC003957.1-201ENST00000625108 2673 ntBASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC116Q8IYX3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC116Q8IYX3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 AC093484.2-201ENST00000580996 2166 ntBASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC116Q8IYX3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms