Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD3Q7Z3D4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 AC142381.4-202ENST00000563973 229 ntBASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.68■□□□□ 0.74
LYSMD3Q7Z3D4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 NBPF21P-201ENST00000425093 1451 ntBASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 RPPH1-201ENST00000516869 333 ntBASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LYSMD3Q7Z3D4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 YBX1P10-201ENST00000444752 975 ntBASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 AL359736.2-201ENST00000621992 437 ntBASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD3Q7Z3D4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LYSMD3Q7Z3D4 AL158047.1-201ENST00000445918 881 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms