Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TTC41PQ6P2S7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.85■■□□□ 1.41
TTC41PQ6P2S7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TTC41PQ6P2S7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.85■■□□□ 1.41
TTC41PQ6P2S7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TTC41PQ6P2S7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TTC41PQ6P2S7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TTC41PQ6P2S7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 AC004264.1-201ENST00000608354 794 ntBASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.84■■□□□ 1.41
TTC41PQ6P2S7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
TTC41PQ6P2S7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TTC41PQ6P2S7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TTC41PQ6P2S7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.83■■□□□ 1.41
TTC41PQ6P2S7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.83■■□□□ 1.41
TTC41PQ6P2S7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
TTC41PQ6P2S7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.83■■□□□ 1.41
TTC41PQ6P2S7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TTC41PQ6P2S7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TTC41PQ6P2S7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TTC41PQ6P2S7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TTC41PQ6P2S7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
TTC41PQ6P2S7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.4
TTC41PQ6P2S7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.83■■□□□ 1.4
TTC41PQ6P2S7 AC110285.5-201ENST00000611501 352 ntBASIC23.83■■□□□ 1.4
TTC41PQ6P2S7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TTC41PQ6P2S7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 ABHD17AP1-201ENST00000358206 933 ntBASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 KRT18P29-201ENST00000397031 1267 ntBASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 KRT16P5-201ENST00000455284 522 ntBASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 C1QBPP2-201ENST00000528754 825 ntBASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 C1QL1P1-201ENST00000568105 661 ntBASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.82■■□□□ 1.4
TTC41PQ6P2S7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 PRORSD1P-201ENST00000295112 541 ntBASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC41PQ6P2S7 Z82202.1-201ENST00000623446 1880 ntBASIC23.8■■□□□ 1.4
TTC41PQ6P2S7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TTC41PQ6P2S7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TTC41PQ6P2S7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.8■■□□□ 1.4
TTC41PQ6P2S7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms