Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RNF213Q63HN8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RNF213Q63HN8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RNF213Q63HN8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RNF213Q63HN8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RNF213Q63HN8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RNF213Q63HN8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.52□□□□□ -0.73
RNF213Q63HN8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC10.52□□□□□ -0.73
RNF213Q63HN8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RNF213Q63HN8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RNF213Q63HN8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RNF213Q63HN8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RNF213Q63HN8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC10.52□□□□□ -0.73
RNF213Q63HN8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC10.52□□□□□ -0.73
RNF213Q63HN8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC10.52□□□□□ -0.73
RNF213Q63HN8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
RNF213Q63HN8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RNF213Q63HN8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RNF213Q63HN8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC10.52□□□□□ -0.73
RNF213Q63HN8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC10.52□□□□□ -0.73
RNF213Q63HN8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 STARP1-201ENST00000397973 869 ntBASIC10.51□□□□□ -0.73
RNF213Q63HN8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 RASA4DP-201ENST00000460726 1199 ntBASIC10.51□□□□□ -0.73
RNF213Q63HN8 AP003041.3-201ENST00000527151 707 ntBASIC10.51□□□□□ -0.73
RNF213Q63HN8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 AF238378.1-201ENST00000526806 358 ntBASIC10.51□□□□□ -0.73
RNF213Q63HN8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 SPCS2P1-201ENST00000561636 679 ntBASIC10.51□□□□□ -0.73
RNF213Q63HN8 MIR3687-2-201ENST00000577708 61 ntBASIC10.51□□□□□ -0.73
RNF213Q63HN8 LINC01711-201ENST00000598340 967 ntBASIC10.51□□□□□ -0.73
RNF213Q63HN8 MIR3687-1-201ENST00000614492 61 ntBASIC10.51□□□□□ -0.73
RNF213Q63HN8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 AL035252.4-201ENST00000624174 288 ntBASIC10.51□□□□□ -0.73
RNF213Q63HN8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 AC211486.1-202ENST00000416371 468 ntBASIC10.51□□□□□ -0.73
RNF213Q63HN8 BCRP1-201ENST00000444246 691 ntBASIC10.51□□□□□ -0.73
RNF213Q63HN8 AC211476.1-201ENST00000503899 468 ntBASIC10.51□□□□□ -0.73
RNF213Q63HN8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RNF213Q63HN8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC10.51□□□□□ -0.73
RNF213Q63HN8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 MIR4674-201ENST00000582457 87 ntBASIC10.5□□□□□ -0.73
RNF213Q63HN8 AC138894.3-201ENST00000603787 634 ntBASIC10.5□□□□□ -0.73
RNF213Q63HN8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RNF213Q63HN8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 KRT8P36-201ENST00000489121 1440 ntBASIC10.5□□□□□ -0.73
RNF213Q63HN8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RNF213Q63HN8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RNF213Q63HN8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RNF213Q63HN8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RNF213Q63HN8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 ECEL1P1-201ENST00000373592 1742 ntBASIC10.5□□□□□ -0.73
RNF213Q63HN8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RNF213Q63HN8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RNF213Q63HN8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC10.5□□□□□ -0.73
RNF213Q63HN8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms