Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 AL160286.2-201ENST00000567150 934 ntBASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 AC091076.1-201ENST00000610741 619 ntBASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC29.81■■■□□ 2.36
CDC42BPAQ5VT25 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 AL441883.1-201ENST00000566170 1045 ntBASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 AL023973.1-201ENST00000624619 620 ntBASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CDC42BPAQ5VT25 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 LINC01465-201ENST00000408887 1940 ntBASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 FAM86EP-206ENST00000510506 987 ntBASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 AL353719.1-201ENST00000566847 864 ntBASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 DBP-204ENST00000599385 709 ntTSL 3 BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 AL121956.5-201ENST00000625261 221 ntBASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDC42BPAQ5VT25 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 TSPY5P-201ENST00000426936 936 ntBASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 KRT18P38-201ENST00000449496 1282 ntBASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC29.78■■■□□ 2.36
CDC42BPAQ5VT25 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC29.77■■■□□ 2.36
CDC42BPAQ5VT25 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
CDC42BPAQ5VT25 CLN6-204ENST00000564752 900 ntTSL 3 BASIC29.77■■■□□ 2.36
CDC42BPAQ5VT25 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDC42BPAQ5VT25 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC29.77■■■□□ 2.36
CDC42BPAQ5VT25 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDC42BPAQ5VT25 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
CDC42BPAQ5VT25 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC29.76■■■□□ 2.36
CDC42BPAQ5VT25 MED25-212ENST00000618715 1467 ntTSL 5 BASIC29.76■■■□□ 2.35
CDC42BPAQ5VT25 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDC42BPAQ5VT25 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDC42BPAQ5VT25 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
CDC42BPAQ5VT25 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDC42BPAQ5VT25 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CDC42BPAQ5VT25 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC29.76■■■□□ 2.35
CDC42BPAQ5VT25 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC29.76■■■□□ 2.35
CDC42BPAQ5VT25 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC29.76■■■□□ 2.35
CDC42BPAQ5VT25 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC29.76■■■□□ 2.35
CDC42BPAQ5VT25 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 NME1-207ENST00000480143 964 ntTSL 2 BASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 CKBP1-201ENST00000565489 1086 ntBASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CDC42BPAQ5VT25 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CDC42BPAQ5VT25 AC092647.4-201ENST00000457211 535 ntBASIC29.74■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms