Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 ID1-201ENST00000376105 1233 ntBASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 LSM12P1-201ENST00000411836 588 ntBASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 BX276092.2-201ENST00000417668 665 ntBASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 AC104771.1-201ENST00000603335 964 ntBASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 AC092118.2-201ENST00000613495 667 ntBASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 TREX1-205ENST00000625293 1783 ntBASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATPAF1Q5TC12 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 AC073210.2-201ENST00000430369 194 ntBASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 MIR4758-201ENST00000577688 71 ntBASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.96■□□□□ 0.31
ATPAF1Q5TC12 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATPAF1Q5TC12 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATPAF1Q5TC12 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATPAF1Q5TC12 AL691432.2-201ENST00000607222 2038 ntBASIC16.96■□□□□ 0.3
ATPAF1Q5TC12 KRT17P1-201ENST00000399211 1546 ntBASIC16.96■□□□□ 0.3
ATPAF1Q5TC12 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATPAF1Q5TC12 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.96■□□□□ 0.3
ATPAF1Q5TC12 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 HCG11-201ENST00000411553 5696 ntBASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 AC142086.2-201ENST00000569753 217 ntBASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF1Q5TC12 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ATPAF1Q5TC12 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms