Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC009078.2-202ENST00000463353 338 ntBASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 MIR3180-1-201ENST00000580374 94 ntBASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 MIR3180-3-201ENST00000584616 94 ntBASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SNAPC4Q5SXM2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC32.18■■■□□ 2.74
SNAPC4Q5SXM2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC32.18■■■□□ 2.74
SNAPC4Q5SXM2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SNAPC4Q5SXM2 AL022342.1-201ENST00000400363 863 ntBASIC32.18■■■□□ 2.74
SNAPC4Q5SXM2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SNAPC4Q5SXM2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC32.18■■■□□ 2.74
SNAPC4Q5SXM2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC32.18■■■□□ 2.74
SNAPC4Q5SXM2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
SNAPC4Q5SXM2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
SNAPC4Q5SXM2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
SNAPC4Q5SXM2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SNAPC4Q5SXM2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SNAPC4Q5SXM2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC32.17■■■□□ 2.74
SNAPC4Q5SXM2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC32.17■■■□□ 2.74
SNAPC4Q5SXM2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
SNAPC4Q5SXM2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
SNAPC4Q5SXM2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC32.17■■■□□ 2.74
SNAPC4Q5SXM2 FGF14-AS2-201ENST00000606448 1074 ntBASIC32.17■■■□□ 2.74
SNAPC4Q5SXM2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC32.17■■■□□ 2.74
SNAPC4Q5SXM2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SNAPC4Q5SXM2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC32.17■■■□□ 2.74
SNAPC4Q5SXM2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC32.17■■■□□ 2.74
SNAPC4Q5SXM2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 AP000593.1-201ENST00000393668 712 ntBASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 CKBP1-201ENST00000565489 1086 ntBASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 IFNL4P1-201ENST00000607083 540 ntBASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 AC121338.2-201ENST00000622535 1744 ntBASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 HBZP1-201ENST00000354915 429 ntBASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC32.16■■■□□ 2.74
SNAPC4Q5SXM2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SNAPC4Q5SXM2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SNAPC4Q5SXM2 DPP3P2-201ENST00000416030 1696 ntBASIC32.15■■■□□ 2.74
SNAPC4Q5SXM2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SNAPC4Q5SXM2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC32.15■■■□□ 2.74
SNAPC4Q5SXM2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC32.15■■■□□ 2.74
SNAPC4Q5SXM2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SNAPC4Q5SXM2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SNAPC4Q5SXM2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SNAPC4Q5SXM2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC32.14■■■□□ 2.74
SNAPC4Q5SXM2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SNAPC4Q5SXM2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC32.14■■■□□ 2.74
SNAPC4Q5SXM2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SNAPC4Q5SXM2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC32.14■■■□□ 2.74
SNAPC4Q5SXM2 AL031008.1-201ENST00000619963 541 ntBASIC32.14■■■□□ 2.74
SNAPC4Q5SXM2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC32.14■■■□□ 2.74
SNAPC4Q5SXM2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SNAPC4Q5SXM2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
SNAPC4Q5SXM2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SNAPC4Q5SXM2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
SNAPC4Q5SXM2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC32.14■■■□□ 2.73
SNAPC4Q5SXM2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 KRT16P6-202ENST00000425692 1426 ntBASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 TMEM179-206ENST00000616017 1645 ntBASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
SNAPC4Q5SXM2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SNAPC4Q5SXM2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
SNAPC4Q5SXM2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
SNAPC4Q5SXM2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC32.12■■■□□ 2.73
SNAPC4Q5SXM2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC32.12■■■□□ 2.73
SNAPC4Q5SXM2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC32.12■■■□□ 2.73
SNAPC4Q5SXM2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC32.12■■■□□ 2.73
SNAPC4Q5SXM2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
SNAPC4Q5SXM2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
SNAPC4Q5SXM2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SNAPC4Q5SXM2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC32.12■■■□□ 2.73
SNAPC4Q5SXM2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC32.12■■■□□ 2.73
SNAPC4Q5SXM2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms