Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-BQ31612 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HLA-BQ31612 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-BQ31612 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
HLA-BQ31612 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-BQ31612 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-BQ31612 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-BQ31612 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.06■□□□□ 0.64
HLA-BQ31612 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-BQ31612 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-BQ31612 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.06■□□□□ 0.64
HLA-BQ31612 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
HLA-BQ31612 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.06■□□□□ 0.64
HLA-BQ31612 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-BQ31612 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-BQ31612 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-BQ31612 AL512604.3-201ENST00000569583 964 ntBASIC19.06■□□□□ 0.64
HLA-BQ31612 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
HLA-BQ31612 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.06■□□□□ 0.64
HLA-BQ31612 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-BQ31612 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-BQ31612 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-BQ31612 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-BQ31612 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-BQ31612 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-BQ31612 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-BQ31612 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HLA-BQ31612 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-BQ31612 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-BQ31612 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-BQ31612 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-BQ31612 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-BQ31612 PCED1CP-201ENST00000419887 785 ntBASIC19.05■□□□□ 0.64
HLA-BQ31612 AC009947.2-201ENST00000444014 672 ntBASIC19.05■□□□□ 0.64
HLA-BQ31612 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-BQ31612 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.05■□□□□ 0.64
HLA-BQ31612 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-BQ31612 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-BQ31612 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-BQ31612 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-BQ31612 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-BQ31612 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-BQ31612 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-BQ31612 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-BQ31612 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-BQ31612 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HLA-BQ31612 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-BQ31612 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HLA-BQ31612 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
HLA-BQ31612 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-BQ31612 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-BQ31612 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.04■□□□□ 0.64
HLA-BQ31612 FAM86EP-206ENST00000510506 987 ntBASIC19.04■□□□□ 0.64
HLA-BQ31612 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.04■□□□□ 0.64
HLA-BQ31612 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-BQ31612 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.04■□□□□ 0.64
HLA-BQ31612 AL160286.2-201ENST00000567150 934 ntBASIC19.04■□□□□ 0.64
HLA-BQ31612 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.04■□□□□ 0.64
HLA-BQ31612 AC140113.3-201ENST00000605663 199 ntBASIC19.04■□□□□ 0.64
HLA-BQ31612 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.04■□□□□ 0.64
HLA-BQ31612 AL121956.5-201ENST00000625261 221 ntBASIC19.04■□□□□ 0.64
HLA-BQ31612 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HLA-BQ31612 AC012676.1-201ENST00000574705 1949 ntBASIC19.04■□□□□ 0.64
HLA-BQ31612 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-BQ31612 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HLA-BQ31612 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.03■□□□□ 0.64
HLA-BQ31612 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.03■□□□□ 0.64
HLA-BQ31612 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HLA-BQ31612 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-BQ31612 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-BQ31612 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-BQ31612 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-BQ31612 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-BQ31612 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-BQ31612 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-BQ31612 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-BQ31612 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.03■□□□□ 0.64
HLA-BQ31612 HOMER2P1-201ENST00000455653 964 ntBASIC19.03■□□□□ 0.64
HLA-BQ31612 KRT126P-201ENST00000549467 1181 ntBASIC19.03■□□□□ 0.64
HLA-BQ31612 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.03■□□□□ 0.64
HLA-BQ31612 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.03■□□□□ 0.64
HLA-BQ31612 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-BQ31612 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
HLA-BQ31612 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-BQ31612 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-BQ31612 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-BQ31612 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HLA-BQ31612 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms