Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRICKLE4Q2TBC4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 AC239809.2-201ENST00000415381 517 ntBASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 TUBB8P6-201ENST00000436895 1288 ntBASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 AC124016.1-201ENST00000609552 612 ntBASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE4Q2TBC4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 KRT8P8-201ENST00000434750 1448 ntBASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 KRASP1-201ENST00000407852 552 ntBASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 AC133681.1-201ENST00000465482 601 ntBASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE4Q2TBC4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 KRT18P29-201ENST00000397031 1267 ntBASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE4Q2TBC4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.22■□□□□ 0.51
PRICKLE4Q2TBC4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.22■□□□□ 0.51
PRICKLE4Q2TBC4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PRICKLE4Q2TBC4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRICKLE4Q2TBC4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRICKLE4Q2TBC4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRICKLE4Q2TBC4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRICKLE4Q2TBC4 ABHD17AP1-201ENST00000358206 933 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms