Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 FAM210CP-201ENST00000445714 574 ntBASIC23.78■■□□□ 1.4
RFX7Q2KHR2 AP003071.4-201ENST00000562276 1284 ntBASIC23.78■■□□□ 1.4
RFX7Q2KHR2 CD177P1-201ENST00000606252 935 ntBASIC23.78■■□□□ 1.4
RFX7Q2KHR2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFX7Q2KHR2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
RFX7Q2KHR2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.39
RFX7Q2KHR2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFX7Q2KHR2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.75■■□□□ 1.39
RFX7Q2KHR2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 FAM197Y1-201ENST00000421178 764 ntBASIC23.74■■□□□ 1.39
RFX7Q2KHR2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFX7Q2KHR2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 AP006587.1-201ENST00000534129 1502 ntBASIC23.73■■□□□ 1.39
RFX7Q2KHR2 NUDT16P1-203ENST00000513809 620 ntBASIC23.73■■□□□ 1.39
RFX7Q2KHR2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 AC073195.1-201ENST00000607241 877 ntBASIC23.73■■□□□ 1.39
RFX7Q2KHR2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFX7Q2KHR2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.72■■□□□ 1.39
RFX7Q2KHR2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFX7Q2KHR2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
RFX7Q2KHR2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFX7Q2KHR2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.72■■□□□ 1.39
RFX7Q2KHR2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFX7Q2KHR2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RFX7Q2KHR2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFX7Q2KHR2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFX7Q2KHR2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFX7Q2KHR2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.72■■□□□ 1.39
RFX7Q2KHR2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFX7Q2KHR2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms