Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.86■□□□□ 0.29
ABCA4P78363 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.86■□□□□ 0.29
ABCA4P78363 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.86■□□□□ 0.29
ABCA4P78363 Z85996.1-201ENST00000494644 937 ntBASIC16.86■□□□□ 0.29
ABCA4P78363 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.86■□□□□ 0.29
ABCA4P78363 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.86■□□□□ 0.29
ABCA4P78363 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.86■□□□□ 0.29
ABCA4P78363 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.86■□□□□ 0.29
ABCA4P78363 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.86■□□□□ 0.29
ABCA4P78363 AC006011.2-201ENST00000621313 1158 ntBASIC16.86■□□□□ 0.29
ABCA4P78363 MYC-208ENST00000641036 567 ntBASIC16.86■□□□□ 0.29
ABCA4P78363 AL391422.3-201ENST00000603791 2761 ntBASIC16.86■□□□□ 0.29
ABCA4P78363 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.86■□□□□ 0.29
ABCA4P78363 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
ABCA4P78363 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
ABCA4P78363 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 INGX-201ENST00000359239 846 ntBASIC16.86■□□□□ 0.29
ABCA4P78363 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ABCA4P78363 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ABCA4P78363 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.86■□□□□ 0.29
ABCA4P78363 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ABCA4P78363 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ABCA4P78363 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
ABCA4P78363 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ABCA4P78363 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.85■□□□□ 0.29
ABCA4P78363 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 AC004951.3-201ENST00000418645 1148 ntBASIC16.85■□□□□ 0.29
ABCA4P78363 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.85■□□□□ 0.29
ABCA4P78363 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ABCA4P78363 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
ABCA4P78363 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.85■□□□□ 0.29
ABCA4P78363 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
ABCA4P78363 KRT18P48-201ENST00000434763 852 ntBASIC16.85■□□□□ 0.29
ABCA4P78363 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.85■□□□□ 0.29
ABCA4P78363 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.85■□□□□ 0.29
ABCA4P78363 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ABCA4P78363 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA4P78363 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA4P78363 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ABCA4P78363 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.84■□□□□ 0.29
ABCA4P78363 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA4P78363 DPP3P2-201ENST00000416030 1696 ntBASIC16.84■□□□□ 0.29
ABCA4P78363 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ABCA4P78363 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ABCA4P78363 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.84■□□□□ 0.29
ABCA4P78363 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.84■□□□□ 0.29
ABCA4P78363 FAM8A6P-201ENST00000407496 1135 ntBASIC16.84■□□□□ 0.29
ABCA4P78363 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
ABCA4P78363 AC117947.1-201ENST00000427448 529 ntBASIC16.84■□□□□ 0.29
ABCA4P78363 EGLN1P1-201ENST00000531623 762 ntBASIC16.84■□□□□ 0.29
ABCA4P78363 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.84■□□□□ 0.29
ABCA4P78363 AP000550.4-202ENST00000639755 178 ntBASIC16.84■□□□□ 0.29
ABCA4P78363 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA4P78363 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.84■□□□□ 0.29
ABCA4P78363 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA4P78363 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA4P78363 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA4P78363 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA4P78363 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.84■□□□□ 0.29
ABCA4P78363 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA4P78363 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA4P78363 AL031133.1-201ENST00000406807 723 ntBASIC16.84■□□□□ 0.29
ABCA4P78363 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.84■□□□□ 0.29
ABCA4P78363 AC130371.2-201ENST00000619443 611 ntBASIC16.84■□□□□ 0.29
ABCA4P78363 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA4P78363 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ABCA4P78363 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
ABCA4P78363 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
ABCA4P78363 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ABCA4P78363 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.83■□□□□ 0.29
ABCA4P78363 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ABCA4P78363 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ABCA4P78363 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.83■□□□□ 0.29
ABCA4P78363 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ABCA4P78363 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ABCA4P78363 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
ABCA4P78363 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms