Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNRPFP62306 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.33■■□□□ 1.01
SNRPFP62306 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SNRPFP62306 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
SNRPFP62306 KRASP1-201ENST00000407852 552 ntBASIC21.33■■□□□ 1.01
SNRPFP62306 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SNRPFP62306 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.33■■□□□ 1.01
SNRPFP62306 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.33■■□□□ 1.01
SNRPFP62306 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SNRPFP62306 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.33■■□□□ 1
SNRPFP62306 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.33■■□□□ 1
SNRPFP62306 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SNRPFP62306 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SNRPFP62306 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRPFP62306 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRPFP62306 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
SNRPFP62306 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.32■■□□□ 1
SNRPFP62306 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.32■■□□□ 1
SNRPFP62306 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRPFP62306 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.32■■□□□ 1
SNRPFP62306 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.32■■□□□ 1
SNRPFP62306 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
SNRPFP62306 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SNRPFP62306 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.32■■□□□ 1
SNRPFP62306 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.32■■□□□ 1
SNRPFP62306 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
SNRPFP62306 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SNRPFP62306 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNRPFP62306 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SNRPFP62306 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SNRPFP62306 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNRPFP62306 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.31■■□□□ 1
SNRPFP62306 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.31■■□□□ 1
SNRPFP62306 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.31■■□□□ 1
SNRPFP62306 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNRPFP62306 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.31■■□□□ 1
SNRPFP62306 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNRPFP62306 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.31■■□□□ 1
SNRPFP62306 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNRPFP62306 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNRPFP62306 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNRPFP62306 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.31■■□□□ 1
SNRPFP62306 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SNRPFP62306 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.3■■□□□ 1
SNRPFP62306 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNRPFP62306 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SNRPFP62306 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.3■■□□□ 1
SNRPFP62306 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.3■■□□□ 1
SNRPFP62306 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNRPFP62306 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.3■■□□□ 1
SNRPFP62306 KRT18P29-201ENST00000397031 1267 ntBASIC21.3■■□□□ 1
SNRPFP62306 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
SNRPFP62306 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.3■■□□□ 1
SNRPFP62306 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SNRPFP62306 C1QL1P1-201ENST00000568105 661 ntBASIC21.3■■□□□ 1
SNRPFP62306 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.3■■□□□ 1
SNRPFP62306 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.3■■□□□ 1
SNRPFP62306 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNRPFP62306 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNRPFP62306 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.29■■□□□ 1
SNRPFP62306 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.29■■□□□ 1
SNRPFP62306 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.29■■□□□ 1
SNRPFP62306 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.29■■□□□ 1
SNRPFP62306 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.29■■□□□ 1
SNRPFP62306 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SNRPFP62306 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SNRPFP62306 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.29■■□□□ 1
SNRPFP62306 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.29■■□□□ 1
SNRPFP62306 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SNRPFP62306 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.29■■□□□ 1
SNRPFP62306 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SNRPFP62306 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SNRPFP62306 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNRPFP62306 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNRPFP62306 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.28■■□□□ 1
SNRPFP62306 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNRPFP62306 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNRPFP62306 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNRPFP62306 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.28■■□□□ 1
SNRPFP62306 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SNRPFP62306 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.28■■□□□ 1
SNRPFP62306 RPPH1-201ENST00000516869 333 ntBASIC21.28■■□□□ 1
SNRPFP62306 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms