Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CKS1BP61024 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.67□□□□□ -0.22
CKS1BP61024 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 AC024257.2-201ENST00000549699 147 ntBASIC13.67□□□□□ -0.22
CKS1BP61024 AC027682.1-201ENST00000562846 899 ntBASIC13.67□□□□□ -0.22
CKS1BP61024 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC13.67□□□□□ -0.22
CKS1BP61024 AC053503.5-201ENST00000601508 636 ntBASIC13.67□□□□□ -0.22
CKS1BP61024 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
CKS1BP61024 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.67□□□□□ -0.22
CKS1BP61024 AL512408.1-201ENST00000569378 2000 ntBASIC13.67□□□□□ -0.22
CKS1BP61024 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CKS1BP61024 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CKS1BP61024 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.67□□□□□ -0.22
CKS1BP61024 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CKS1BP61024 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC13.66□□□□□ -0.22
CKS1BP61024 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
CKS1BP61024 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CKS1BP61024 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.66□□□□□ -0.22
CKS1BP61024 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CKS1BP61024 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CKS1BP61024 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.66□□□□□ -0.22
CKS1BP61024 AC099791.1-201ENST00000416440 715 ntBASIC13.66□□□□□ -0.22
CKS1BP61024 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.66□□□□□ -0.22
CKS1BP61024 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.66□□□□□ -0.22
CKS1BP61024 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.66□□□□□ -0.22
CKS1BP61024 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.66□□□□□ -0.22
CKS1BP61024 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CKS1BP61024 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.66□□□□□ -0.22
CKS1BP61024 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS1BP61024 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
CKS1BP61024 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.65□□□□□ -0.22
CKS1BP61024 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.65□□□□□ -0.22
CKS1BP61024 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CKS1BP61024 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CKS1BP61024 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.65□□□□□ -0.22
CKS1BP61024 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
CKS1BP61024 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.65□□□□□ -0.22
CKS1BP61024 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CKS1BP61024 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CKS1BP61024 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
CKS1BP61024 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS1BP61024 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.65□□□□□ -0.22
CKS1BP61024 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC13.65□□□□□ -0.22
CKS1BP61024 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.65□□□□□ -0.22
CKS1BP61024 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC13.65□□□□□ -0.22
CKS1BP61024 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.65□□□□□ -0.22
CKS1BP61024 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms