Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 HTR7P1-201ENST00000538670 1336 ntBASIC18.75■□□□□ 0.59
VSX2P58304 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.75■□□□□ 0.59
VSX2P58304 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
VSX2P58304 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.75■□□□□ 0.59
VSX2P58304 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.75■□□□□ 0.59
VSX2P58304 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.75■□□□□ 0.59
VSX2P58304 RARRES2P10-201ENST00000564312 460 ntBASIC18.75■□□□□ 0.59
VSX2P58304 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.75■□□□□ 0.59
VSX2P58304 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
VSX2P58304 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
VSX2P58304 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.75■□□□□ 0.59
VSX2P58304 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VSX2P58304 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VSX2P58304 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VSX2P58304 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VSX2P58304 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
VSX2P58304 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.74■□□□□ 0.59
VSX2P58304 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 PCDHAC2-203ENST00000615316 3011 ntBASIC18.74■□□□□ 0.59
VSX2P58304 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
VSX2P58304 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.74■□□□□ 0.59
VSX2P58304 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
VSX2P58304 RPS2P55-201ENST00000397318 883 ntBASIC18.74■□□□□ 0.59
VSX2P58304 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 AC107956.1-201ENST00000494359 873 ntBASIC18.74■□□□□ 0.59
VSX2P58304 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.74■□□□□ 0.59
VSX2P58304 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.74■□□□□ 0.59
VSX2P58304 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.74■□□□□ 0.59
VSX2P58304 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
VSX2P58304 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.74■□□□□ 0.59
VSX2P58304 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VSX2P58304 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VSX2P58304 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.73■□□□□ 0.59
VSX2P58304 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
VSX2P58304 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VSX2P58304 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VSX2P58304 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.73■□□□□ 0.59
VSX2P58304 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
VSX2P58304 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.73■□□□□ 0.59
VSX2P58304 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.73■□□□□ 0.59
VSX2P58304 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.73■□□□□ 0.59
VSX2P58304 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.73■□□□□ 0.59
VSX2P58304 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
VSX2P58304 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VSX2P58304 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
VSX2P58304 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 AL135905.2-201ENST00000584934 1404 ntBASIC18.73■□□□□ 0.59
VSX2P58304 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.73■□□□□ 0.59
VSX2P58304 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.73■□□□□ 0.59
VSX2P58304 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VSX2P58304 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VSX2P58304 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VSX2P58304 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 AC009237.14-201ENST00000609975 1594 ntBASIC18.72■□□□□ 0.59
VSX2P58304 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VSX2P58304 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.72■□□□□ 0.59
VSX2P58304 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VSX2P58304 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms