Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.58■□□□□ 0.89
ATXN1P54253 AL049597.2-201ENST00000565575 961 ntBASIC20.58■□□□□ 0.89
ATXN1P54253 AC069544.1-201ENST00000609399 999 ntBASIC20.58■□□□□ 0.89
ATXN1P54253 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATXN1P54253 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATXN1P54253 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATXN1P54253 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.58■□□□□ 0.88
ATXN1P54253 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATXN1P54253 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN1P54253 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN1P54253 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ATXN1P54253 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.57■□□□□ 0.88
ATXN1P54253 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN1P54253 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN1P54253 AL158211.5-201ENST00000623583 2518 ntBASIC20.57■□□□□ 0.88
ATXN1P54253 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN1P54253 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN1P54253 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN1P54253 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
ATXN1P54253 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN1P54253 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.57■□□□□ 0.88
ATXN1P54253 TFP1-202ENST00000475455 1573 ntBASIC20.57■□□□□ 0.88
ATXN1P54253 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.57■□□□□ 0.88
ATXN1P54253 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.57■□□□□ 0.88
ATXN1P54253 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ATXN1P54253 MIR4785-201ENST00000585005 73 ntBASIC20.57■□□□□ 0.88
ATXN1P54253 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ATXN1P54253 AC009237.14-201ENST00000609975 1594 ntBASIC20.57■□□□□ 0.88
ATXN1P54253 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ATXN1P54253 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.57■□□□□ 0.88
ATXN1P54253 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN1P54253 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATXN1P54253 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN1P54253 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ATXN1P54253 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.56■□□□□ 0.88
ATXN1P54253 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN1P54253 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ATXN1P54253 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN1P54253 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN1P54253 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATXN1P54253 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN1P54253 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.56■□□□□ 0.88
ATXN1P54253 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.56■□□□□ 0.88
ATXN1P54253 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN1P54253 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.56■□□□□ 0.88
ATXN1P54253 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.56■□□□□ 0.88
ATXN1P54253 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.56■□□□□ 0.88
ATXN1P54253 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.56■□□□□ 0.88
ATXN1P54253 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN1P54253 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATXN1P54253 AL049637.2-201ENST00000641778 930 ntBASIC20.56■□□□□ 0.88
ATXN1P54253 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATXN1P54253 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ATXN1P54253 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATXN1P54253 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
ATXN1P54253 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN1P54253 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN1P54253 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN1P54253 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN1P54253 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN1P54253 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.55■□□□□ 0.88
ATXN1P54253 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.55■□□□□ 0.88
ATXN1P54253 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.55■□□□□ 0.88
ATXN1P54253 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN1P54253 AP001412.1-201ENST00000608405 714 ntBASIC20.55■□□□□ 0.88
ATXN1P54253 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.55■□□□□ 0.88
ATXN1P54253 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ATXN1P54253 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN1P54253 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN1P54253 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ATXN1P54253 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.55■□□□□ 0.88
ATXN1P54253 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATXN1P54253 AP001271.2-201ENST00000624018 1556 ntBASIC20.55■□□□□ 0.88
ATXN1P54253 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ATXN1P54253 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.54■□□□□ 0.88
ATXN1P54253 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.54■□□□□ 0.88
ATXN1P54253 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ATXN1P54253 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.54■□□□□ 0.88
ATXN1P54253 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.54■□□□□ 0.88
ATXN1P54253 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
ATXN1P54253 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
ATXN1P54253 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.54■□□□□ 0.88
ATXN1P54253 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ATXN1P54253 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ATXN1P54253 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
ATXN1P54253 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATXN1P54253 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.54■□□□□ 0.88
ATXN1P54253 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms