Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMSP52788 KRT8P36-201ENST00000489121 1440 ntBASIC18.32■□□□□ 0.52
SMSP52788 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMSP52788 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMSP52788 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SMSP52788 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMSP52788 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMSP52788 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
SMSP52788 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMSP52788 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMSP52788 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMSP52788 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMSP52788 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMSP52788 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.31■□□□□ 0.52
SMSP52788 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SMSP52788 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.31■□□□□ 0.52
SMSP52788 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.31■□□□□ 0.52
SMSP52788 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMSP52788 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMSP52788 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMSP52788 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SMSP52788 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.3■□□□□ 0.52
SMSP52788 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SMSP52788 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
SMSP52788 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.3■□□□□ 0.52
SMSP52788 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.3■□□□□ 0.52
SMSP52788 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.3■□□□□ 0.52
SMSP52788 AC069544.1-201ENST00000609399 999 ntBASIC18.3■□□□□ 0.52
SMSP52788 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SMSP52788 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SMSP52788 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.3■□□□□ 0.52
SMSP52788 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMSP52788 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SMSP52788 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.29■□□□□ 0.52
SMSP52788 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMSP52788 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.29■□□□□ 0.52
SMSP52788 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMSP52788 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMSP52788 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMSP52788 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMSP52788 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMSP52788 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMSP52788 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMSP52788 SNORA78-201ENST00000459373 127 ntBASIC18.29■□□□□ 0.52
SMSP52788 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMSP52788 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.29■□□□□ 0.52
SMSP52788 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.29■□□□□ 0.52
SMSP52788 Z99916.2-201ENST00000604037 246 ntBASIC18.29■□□□□ 0.52
SMSP52788 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SMSP52788 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SMSP52788 REXO1L12P-201ENST00000622156 912 ntBASIC18.29■□□□□ 0.52
SMSP52788 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.29■□□□□ 0.52
SMSP52788 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMSP52788 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SMSP52788 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMSP52788 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMSP52788 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.29■□□□□ 0.52
SMSP52788 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 AL691432.2-201ENST00000607222 2038 ntBASIC18.28■□□□□ 0.52
SMSP52788 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SMSP52788 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.28■□□□□ 0.52
SMSP52788 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.28■□□□□ 0.52
SMSP52788 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SMSP52788 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.28■□□□□ 0.52
SMSP52788 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 POM121L13P-201ENST00000422362 380 ntBASIC18.28■□□□□ 0.52
SMSP52788 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.28■□□□□ 0.52
SMSP52788 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.28■□□□□ 0.52
SMSP52788 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMSP52788 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SMSP52788 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMSP52788 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMSP52788 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.27■□□□□ 0.52
SMSP52788 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.27■□□□□ 0.52
SMSP52788 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms