Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2A1P52655 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2A1P52655 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2A1P52655 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GTF2A1P52655 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
GTF2A1P52655 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2A1P52655 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GTF2A1P52655 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2A1P52655 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.21■□□□□ 0.67
GTF2A1P52655 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.21■□□□□ 0.67
GTF2A1P52655 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A1P52655 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A1P52655 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A1P52655 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A1P52655 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A1P52655 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A1P52655 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
GTF2A1P52655 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.2■□□□□ 0.66
GTF2A1P52655 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
GTF2A1P52655 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A1P52655 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A1P52655 AC103724.3-201ENST00000564481 992 ntBASIC19.2■□□□□ 0.66
GTF2A1P52655 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
GTF2A1P52655 AC137630.3-201ENST00000607245 391 ntBASIC19.2■□□□□ 0.66
GTF2A1P52655 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.2■□□□□ 0.66
GTF2A1P52655 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.2■□□□□ 0.66
GTF2A1P52655 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
GTF2A1P52655 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A1P52655 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A1P52655 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
GTF2A1P52655 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.2■□□□□ 0.66
GTF2A1P52655 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2A1P52655 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GTF2A1P52655 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 KRT8P33-201ENST00000508125 1423 ntBASIC19.19■□□□□ 0.66
GTF2A1P52655 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GTF2A1P52655 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GTF2A1P52655 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GTF2A1P52655 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.19■□□□□ 0.66
GTF2A1P52655 MIR6722-201ENST00000617286 78 ntBASIC19.19■□□□□ 0.66
GTF2A1P52655 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.19■□□□□ 0.66
GTF2A1P52655 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
GTF2A1P52655 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.19■□□□□ 0.66
GTF2A1P52655 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF2A1P52655 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.18■□□□□ 0.66
GTF2A1P52655 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.18■□□□□ 0.66
GTF2A1P52655 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.18■□□□□ 0.66
GTF2A1P52655 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.18■□□□□ 0.66
GTF2A1P52655 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.18■□□□□ 0.66
GTF2A1P52655 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GTF2A1P52655 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GTF2A1P52655 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2A1P52655 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2A1P52655 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.17■□□□□ 0.66
GTF2A1P52655 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
GTF2A1P52655 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2A1P52655 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2A1P52655 AC121338.2-201ENST00000622535 1744 ntBASIC19.17■□□□□ 0.66
GTF2A1P52655 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.17■□□□□ 0.66
GTF2A1P52655 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2A1P52655 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2A1P52655 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.17■□□□□ 0.66
GTF2A1P52655 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2A1P52655 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GTF2A1P52655 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
GTF2A1P52655 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.17■□□□□ 0.66
GTF2A1P52655 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2A1P52655 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms