Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.23■□□□□ 0.35
CCR9P51686 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCR9P51686 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCR9P51686 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
CCR9P51686 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.23■□□□□ 0.35
CCR9P51686 DUX4L16-201ENST00000555130 1264 ntBASIC17.23■□□□□ 0.35
CCR9P51686 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.23■□□□□ 0.35
CCR9P51686 AC137761.2-201ENST00000561729 223 ntBASIC17.23■□□□□ 0.35
CCR9P51686 AC145350.3-201ENST00000569033 163 ntBASIC17.23■□□□□ 0.35
CCR9P51686 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.23■□□□□ 0.35
CCR9P51686 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.23■□□□□ 0.35
CCR9P51686 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCR9P51686 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.23■□□□□ 0.35
CCR9P51686 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.23■□□□□ 0.35
CCR9P51686 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.23■□□□□ 0.35
CCR9P51686 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.23■□□□□ 0.35
CCR9P51686 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCR9P51686 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCR9P51686 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCR9P51686 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCR9P51686 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCR9P51686 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCR9P51686 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCR9P51686 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCR9P51686 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCR9P51686 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCR9P51686 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCR9P51686 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCR9P51686 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCR9P51686 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCR9P51686 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.22■□□□□ 0.35
CCR9P51686 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCR9P51686 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCR9P51686 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.22■□□□□ 0.35
CCR9P51686 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.22■□□□□ 0.35
CCR9P51686 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.22■□□□□ 0.35
CCR9P51686 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.22■□□□□ 0.35
CCR9P51686 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCR9P51686 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCR9P51686 AC069236.1-201ENST00000604339 616 ntBASIC17.22■□□□□ 0.35
CCR9P51686 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CCR9P51686 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CCR9P51686 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCR9P51686 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCR9P51686 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CCR9P51686 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CCR9P51686 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCR9P51686 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCR9P51686 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCR9P51686 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.21■□□□□ 0.35
CCR9P51686 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.21■□□□□ 0.35
CCR9P51686 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.21■□□□□ 0.35
CCR9P51686 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCR9P51686 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCR9P51686 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCR9P51686 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.21■□□□□ 0.35
CCR9P51686 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCR9P51686 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CCR9P51686 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCR9P51686 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CCR9P51686 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCR9P51686 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCR9P51686 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.2■□□□□ 0.34
CCR9P51686 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.2■□□□□ 0.34
CCR9P51686 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.2■□□□□ 0.34
CCR9P51686 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.2■□□□□ 0.34
CCR9P51686 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCR9P51686 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCR9P51686 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCR9P51686 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.2■□□□□ 0.34
CCR9P51686 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCR9P51686 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCR9P51686 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCR9P51686 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCR9P51686 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.2■□□□□ 0.34
CCR9P51686 C2orf69P4-201ENST00000565394 541 ntBASIC17.2■□□□□ 0.34
CCR9P51686 AL589743.5-201ENST00000616611 1050 ntBASIC17.2■□□□□ 0.34
CCR9P51686 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.2■□□□□ 0.34
CCR9P51686 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCR9P51686 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCR9P51686 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCR9P51686 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCR9P51686 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCR9P51686 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCR9P51686 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms